ec volume support deletes

weed/server/volume_grpc_copy.go

@@ -55,11 +55,11 @@ func (vs *VolumeServer) VolumeCopy(ctx context.Context, req *volume_server_pb.Vo
 
 		// println("source:", volFileInfoResp.String())
 		// copy ecx file
-		if err := vs.doCopyFile(ctx, client, false, req.Collection, req.VolumeId, volFileInfoResp.CompactionRevision, volFileInfoResp.IdxFileSize, volumeFileName, ".idx"); err != nil {
+		if err := vs.doCopyFile(ctx, client, false, req.Collection, req.VolumeId, volFileInfoResp.CompactionRevision, volFileInfoResp.IdxFileSize, volumeFileName, ".idx", false); err != nil {
 			return err
 		}
 
-		if err := vs.doCopyFile(ctx, client, false, req.Collection, req.VolumeId, volFileInfoResp.CompactionRevision, volFileInfoResp.DatFileSize, volumeFileName, ".dat"); err != nil {
+		if err := vs.doCopyFile(ctx, client, false, req.Collection, req.VolumeId, volFileInfoResp.CompactionRevision, volFileInfoResp.DatFileSize, volumeFileName, ".dat", false); err != nil {
 			return err
 		}
 
@@ -95,7 +95,7 @@ func (vs *VolumeServer) VolumeCopy(ctx context.Context, req *volume_server_pb.Vo
 }
 
 func (vs *VolumeServer) doCopyFile(ctx context.Context, client volume_server_pb.VolumeServerClient, isEcVolume bool, collection string, vid uint32,
-	compactRevision uint32, stopOffset uint64, baseFileName, ext string) error {
+	compactRevision uint32, stopOffset uint64, baseFileName, ext string, isAppend bool) error {
 
 	copyFileClient, err := client.CopyFile(ctx, &volume_server_pb.CopyFileRequest{
 		VolumeId:           vid,
@@ -109,7 +109,7 @@ func (vs *VolumeServer) doCopyFile(ctx context.Context, client volume_server_pb.
 		return fmt.Errorf("failed to start copying volume %d %s file: %v", vid, ext, err)
 	}
 
-	err = writeToFile(copyFileClient, baseFileName+ext, util.NewWriteThrottler(vs.compactionBytePerSecond))
+	err = writeToFile(copyFileClient, baseFileName+ext, util.NewWriteThrottler(vs.compactionBytePerSecond), isAppend)
 	if err != nil {
 		return fmt.Errorf("failed to copy %s file: %v", baseFileName+ext, err)
 	}
@@ -143,9 +143,13 @@ func checkCopyFiles(originFileInf *volume_server_pb.ReadVolumeFileStatusResponse
 	return nil
 }
 
-func writeToFile(client volume_server_pb.VolumeServer_CopyFileClient, fileName string, wt *util.WriteThrottler) error {
+func writeToFile(client volume_server_pb.VolumeServer_CopyFileClient, fileName string, wt *util.WriteThrottler, isAppend bool) error {
 	glog.V(4).Infof("writing to %s", fileName)
-	dst, err := os.OpenFile(fileName, os.O_WRONLY|os.O_CREATE|os.O_TRUNC, 0644)
+	flags := os.O_WRONLY|os.O_CREATE|os.O_TRUNC
+	if isAppend {
+		flags = os.O_WRONLY|os.O_CREATE
+	}
+	dst, err := os.OpenFile(fileName, flags, 0644)
 	if err != nil {
 		return nil
 	}

weed/server/volume_grpc_erasure_coding.go

@@ -74,6 +74,11 @@ func (vs *VolumeServer) VolumeEcShardsRebuild(ctx context.Context, req *volume_s
 			} else {
 				rebuiltShardIds = generatedShardIds
 			}
+
+			if err := erasure_coding.RebuildEcxFile(baseFileName); err != nil {
+				return nil, fmt.Errorf("RebuildEcxFile %s: %v", baseFileName, err)
+			}
+
 			break
 		}
 	}
@@ -97,7 +102,7 @@ func (vs *VolumeServer) VolumeEcShardsCopy(ctx context.Context, req *volume_serv
 
 		// copy ec data slices
 		for _, shardId := range req.ShardIds {
-			if err := vs.doCopyFile(ctx, client, true, req.Collection, req.VolumeId, math.MaxUint32, math.MaxInt64, baseFileName, erasure_coding.ToExt(int(shardId))); err != nil {
+			if err := vs.doCopyFile(ctx, client, true, req.Collection, req.VolumeId, math.MaxUint32, math.MaxInt64, baseFileName, erasure_coding.ToExt(int(shardId)), false); err != nil {
 				return err
 			}
 		}
@@ -107,7 +112,12 @@ func (vs *VolumeServer) VolumeEcShardsCopy(ctx context.Context, req *volume_serv
 		}
 
 		// copy ecx file
-		if err := vs.doCopyFile(ctx, client, true, req.Collection, req.VolumeId, math.MaxUint32, math.MaxInt64, baseFileName, ".ecx"); err != nil {
+		if err := vs.doCopyFile(ctx, client, true, req.Collection, req.VolumeId, math.MaxUint32, math.MaxInt64, baseFileName, ".ecx", false); err != nil {
+			return err
+		}
+
+		// copy ecj file
+		if err := vs.doCopyFile(ctx, client, true, req.Collection, req.VolumeId, math.MaxUint32, math.MaxInt64, baseFileName, ".ecj", true); err != nil {
 			return err
 		}
 
@@ -166,6 +176,9 @@ func (vs *VolumeServer) VolumeEcShardsDelete(ctx context.Context, req *volume_se
 		if err := os.Remove(baseFilename + ".ecx"); err != nil {
 			return nil, err
 		}
+		if err := os.Remove(baseFilename + ".ecj"); err != nil {
+			return nil, err
+		}
 	}
 
 	return &volume_server_pb.VolumeEcShardsDeleteResponse{}, nil

weed/storage/erasure_coding/ec_encoder.go

@@ -32,7 +32,7 @@ func WriteSortedEcxFile(baseFileName string) (e error) {
 
 	ecxFile, err := os.OpenFile(baseFileName+".ecx", os.O_TRUNC|os.O_CREATE|os.O_WRONLY, 0644)
 	if err != nil {
-		return fmt.Errorf("failed to open dat file: %v", err)
+		return fmt.Errorf("failed to open ecx file: %v", err)
 	}
 	defer ecxFile.Close()
 
@@ -43,7 +43,7 @@ func WriteSortedEcxFile(baseFileName string) (e error) {
 	})
 
 	if err != nil {
-		return fmt.Errorf("failed to open dat file: %v", err)
+		return fmt.Errorf("failed to visit ecx file: %v", err)
 	}
 
 	return nil
@@ -202,7 +202,7 @@ func encodeDatFile(remainingSize int64, err error, baseFileName string, bufferSi
 	outputs, err := openEcFiles(baseFileName, false)
 	defer closeEcFiles(outputs)
 	if err != nil {
-		return fmt.Errorf("failed to open dat file: %v", err)
+		return fmt.Errorf("failed to open ec files %s: %v", baseFileName, err)
 	}
 
 	for remainingSize > largeBlockSize*DataShardsCount {

weed/storage/erasure_coding/ec_volume.go

@@ -1,6 +1,7 @@
 package erasure_coding
 
 import (
+	"errors"
 	"fmt"
 	"math"
 	"os"
@@ -14,6 +15,10 @@ import (
 	"github.com/chrislusf/seaweedfs/weed/storage/types"
 )
 
+var (
+	NotFoundError = errors.New("needle not found")
+)
+
 type EcVolume struct {
 	VolumeId                  needle.VolumeId
 	Collection                string
@@ -26,6 +31,8 @@ type EcVolume struct {
 	ShardLocationsRefreshTime time.Time
 	ShardLocationsLock        sync.RWMutex
 	Version                   needle.Version
+	ecjFile                   *os.File
+	ecjFileAccessLock         sync.Mutex
 }
 
 func NewEcVolume(dir string, collection string, vid needle.VolumeId) (ev *EcVolume, err error) {
@@ -34,8 +41,8 @@ func NewEcVolume(dir string, collection string, vid needle.VolumeId) (ev *EcVolu
 	baseFileName := EcShardFileName(collection, dir, int(vid))
 
 	// open ecx file
-	if ev.ecxFile, err = os.OpenFile(baseFileName+".ecx", os.O_RDONLY, 0644); err != nil {
-		return nil, fmt.Errorf("cannot read ec volume index %s.ecx: %v", baseFileName, err)
+	if ev.ecxFile, err = os.OpenFile(baseFileName+".ecx", os.O_RDWR, 0644); err != nil {
+		return nil, fmt.Errorf("cannot open ec volume index %s.ecx: %v", baseFileName, err)
 	}
 	ecxFi, statErr := ev.ecxFile.Stat()
 	if statErr != nil {
@@ -44,6 +51,11 @@ func NewEcVolume(dir string, collection string, vid needle.VolumeId) (ev *EcVolu
 	ev.ecxFileSize = ecxFi.Size()
 	ev.ecxCreatedAt = ecxFi.ModTime()
 
+	// open ecj file
+	if ev.ecjFile, err = os.OpenFile(baseFileName+".ecj", os.O_RDWR|os.O_CREATE, 0644); err != nil {
+		return nil, fmt.Errorf("cannot open ec volume journal %s.ecj: %v", baseFileName, err)
+	}
+
 	ev.ShardLocations = make(map[ShardId][]string)
 
 	return
@@ -93,6 +105,12 @@ func (ev *EcVolume) Close() {
 	for _, s := range ev.Shards {
 		s.Close()
 	}
+	if ev.ecjFile != nil {
+		ev.ecjFileAccessLock.Lock()
+		_ = ev.ecjFile.Close()
+		ev.ecjFile = nil
+		ev.ecjFileAccessLock.Unlock()
+	}
 	if ev.ecxFile != nil {
 		_ = ev.ecxFile.Close()
 		ev.ecxFile = nil
@@ -107,6 +125,7 @@ func (ev *EcVolume) Destroy() {
 		s.Destroy()
 	}
 	os.Remove(ev.FileName() + ".ecx")
+	os.Remove(ev.FileName() + ".ecj")
 }
 
 func (ev *EcVolume) FileName() string {
@@ -167,16 +186,23 @@ func (ev *EcVolume) LocateEcShardNeedle(n *needle.Needle, version needle.Version
 }
 
 func (ev *EcVolume) findNeedleFromEcx(needleId types.NeedleId) (offset types.Offset, size uint32, err error) {
+	return searchNeedleFromEcx(ev.ecxFile, ev.ecxFileSize, needleId, nil)
+}
+
+func searchNeedleFromEcx(ecxFile *os.File, ecxFileSize int64, needleId types.NeedleId, processNeedleFn func(file *os.File, offset int64) error) (offset types.Offset, size uint32, err error) {
 	var key types.NeedleId
 	buf := make([]byte, types.NeedleMapEntrySize)
-	l, h := int64(0), ev.ecxFileSize/types.NeedleMapEntrySize
+	l, h := int64(0), ecxFileSize/types.NeedleMapEntrySize
 	for l < h {
 		m := (l + h) / 2
-		if _, err := ev.ecxFile.ReadAt(buf, m*types.NeedleMapEntrySize); err != nil {
-			return types.Offset{}, 0, fmt.Errorf("ecx file %d read at %d: %v", ev.ecxFileSize, m*types.NeedleMapEntrySize, err)
+		if _, err := ecxFile.ReadAt(buf, m*types.NeedleMapEntrySize); err != nil {
+			return types.Offset{}, types.TombstoneFileSize, fmt.Errorf("ecx file %d read at %d: %v", ecxFileSize, m*types.NeedleMapEntrySize, err)
 		}
 		key, offset, size = idx.IdxFileEntry(buf)
 		if key == needleId {
+			if processNeedleFn != nil {
+				err = processNeedleFn(ecxFile, m*types.NeedleHeaderSize)
+			}
 			return
 		}
 		if key < needleId {
@@ -186,6 +212,6 @@ func (ev *EcVolume) findNeedleFromEcx(needleId types.NeedleId) (offset types.Off
 		}
 	}
 
-	err = fmt.Errorf("needle id %d not found", needleId)
+	err = NotFoundError
 	return
 }

weed/storage/erasure_coding/ec_volume_delete.go

@@ -0,0 +1,98 @@
+package erasure_coding
+
+import (
+	"fmt"
+	"io"
+	"os"
+
+	"github.com/chrislusf/seaweedfs/weed/storage/types"
+	"github.com/chrislusf/seaweedfs/weed/util"
+)
+
+var (
+	markNeedleDeleted = func(file *os.File, offset int64) error {
+		b := make([]byte, types.SizeSize)
+		util.Uint32toBytes(b, types.TombstoneFileSize)
+		n, err := file.WriteAt(b, offset+types.NeedleIdSize+types.OffsetSize)
+		if err != nil {
+			return fmt.Errorf("ecx write error: %v", err)
+		}
+		if n != types.SizeSize {
+			return fmt.Errorf("ecx written %d bytes, expecting %d", n, types.SizeSize)
+		}
+		return nil
+	}
+)
+
+func (ev *EcVolume) deleteNeedleFromEcx(needleId types.NeedleId) (err error) {
+
+	_, _, err = searchNeedleFromEcx(ev.ecxFile, ev.ecxFileSize, needleId, markNeedleDeleted)
+
+	if err != nil {
+		if err == NotFoundError {
+			return nil
+		}
+		return err
+	}
+
+	b := make([]byte, types.NeedleIdSize)
+	types.NeedleIdToBytes(b, needleId)
+
+	ev.ecjFileAccessLock.Lock()
+
+	ev.ecjFile.Seek(0, io.SeekEnd)
+	ev.ecjFile.Write(b)
+
+	ev.ecjFileAccessLock.Unlock()
+
+	return
+}
+
+func RebuildEcxFile(baseFileName string) error {
+
+	if !util.FileExists(baseFileName + ".ecj") {
+		return nil
+	}
+
+	ecxFile, err := os.OpenFile(baseFileName+".ecx", os.O_RDWR, 0644)
+	if err != nil {
+		return fmt.Errorf("rebuild: failed to open ecx file: %v", err)
+	}
+	defer ecxFile.Close()
+
+	fstat, err := ecxFile.Stat()
+	if err != nil {
+		return err
+	}
+
+	ecxFileSize := fstat.Size()
+
+	ecjFile, err := os.OpenFile(baseFileName+".ecj", os.O_RDWR, 0644)
+	if err != nil {
+		return fmt.Errorf("rebuild: failed to open ecj file: %v", err)
+	}
+
+	buf := make([]byte, types.NeedleIdSize)
+	for {
+		n, _ := ecjFile.Read(buf)
+		if n != types.NeedleIdSize {
+			break
+		}
+
+		needleId := types.BytesToNeedleId(buf)
+
+		_, _, err = searchNeedleFromEcx(ecxFile, ecxFileSize, needleId, markNeedleDeleted)
+
+		if err != nil && err != NotFoundError {
+			ecxFile.Close()
+			return err
+		}
+
+	}
+
+	ecxFile.Close()
+
+	os.Remove(baseFileName + ".ecj")
+
+	return nil
+}

weed/storage/store_ec.go

@@ -15,6 +15,7 @@ import (
 	"github.com/chrislusf/seaweedfs/weed/stats"
 	"github.com/chrislusf/seaweedfs/weed/storage/erasure_coding"
 	"github.com/chrislusf/seaweedfs/weed/storage/needle"
+	"github.com/chrislusf/seaweedfs/weed/storage/types"
 	"github.com/klauspost/reedsolomon"
 )
 
@@ -130,6 +131,9 @@ func (s *Store) ReadEcShardNeedle(ctx context.Context, vid needle.VolumeId, n *n
 			if err != nil {
 				return 0, fmt.Errorf("locate in local ec volume: %v", err)
 			}
+			if size == types.TombstoneFileSize {
+				return 0, fmt.Errorf("entry %s is deleted", n.Id)
+			}
 
 			glog.V(4).Infof("read ec volume %d offset %d size %d intervals:%+v", vid, offset.ToAcutalOffset(), size, intervals)