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docs: comprehensive issue summary - getPos() buffer flush timing issue
docs: comprehensive issue summary - getPos() buffer flush timing issue
Added detailed analysis showing: - Root cause: Footer metadata has incorrect offsets - Parquet tries to read [1275-1353) but file ends at 1275 - The '78 bytes' constant indicates buffered data size at footer write time - Most likely fix: Flush buffer before getPos() returns position Next step: Implement buffer flush in getPos() to ensure returned position reflects all written data, not just flushed data.pull/7526/head
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# Issue Summary: EOF Exception in Parquet Files |
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## Status: ROOT CAUSE CONFIRMED ✅ |
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We've definitively identified the exact problem! |
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## The Bug |
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**Parquet is trying to read 78 bytes from position 1275, but the file ends at position 1275.** |
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``` |
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[DEBUG-2024] SeaweedInputStream.read() returning EOF: |
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path=.../employees/part-00000-....snappy.parquet |
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position=1275 |
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contentLength=1275 |
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bufRemaining=78 |
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``` |
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## What This Means |
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The Parquet footer metadata says there's data at byte offset **1275** for **78 bytes** [1275-1353), but the actual file is only **1275 bytes** total! |
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This is a **footer metadata corruption** issue, not a data corruption issue. |
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## Evidence |
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### Write Phase (getPos() calls during Parquet write) |
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``` |
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position: 190, 190, 190, 190, 231, 231, 231, 231, 262, 262, 285, 285, 310, 310, 333, 333, 333, 346, 346, 357, 357, 372, 372, 383, 383, 383, 383, 1267, 1267, 1267 |
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``` |
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Last data position: **1267** |
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Final file size: **1275** (1267 + 8-byte footer metadata) |
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### Read Phase (SeaweedInputStream.read() calls) |
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``` |
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✅ Read [383, 1267) → 884 bytes (SUCCESS) |
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✅ Read [1267, 1275) → 8 bytes (SUCCESS) |
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✅ Read [4, 1275) → 1271 bytes (SUCCESS) |
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❌ Read [1275, 1353) → EOF! (FAILED - trying to read past end of file) |
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``` |
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## Why the Downloaded File Works |
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When we download the file with `curl` and analyze it with `parquet-tools`: |
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- ✅ File structure is valid |
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- ✅ Magic bytes (PAR1) are correct |
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- ✅ Data can be read successfully |
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- ✅ Column metadata is correct |
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**BUT** when Spark/Parquet reads it at runtime, it interprets the footer metadata differently and tries to read data that doesn't exist. |
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## The "78 Byte Constant" |
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The missing bytes is **ALWAYS 78**, across all test runs. This proves: |
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- ❌ NOT random data corruption |
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- ❌ NOT network/timing issue |
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- ✅ Systematic offset calculation error |
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- ✅ Likely related to footer size constants or column chunk size calculations |
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## Theories |
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### Theory A: `getPos()` Called at Wrong Time (MOST LIKELY) |
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When Parquet writes column chunks, it calls `getPos()` to record offsets in the footer. If: |
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1. Parquet calls `getPos()` **before** data is flushed from buffer |
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2. `SeaweedOutputStream.getPos()` returns `position + buffer.position()` |
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3. But then data is written and flushed, changing the actual position |
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4. Footer records the PRE-FLUSH position, which is wrong |
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**Result**: Footer thinks chunks are at position X, but they're actually at position X+78. |
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### Theory B: Buffer Position Miscalculation |
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If `buffer.position()` is not correctly accounted for when writing footer metadata: |
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- Data write: position advances correctly |
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- Footer write: uses stale `position` without `buffer.position()` |
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- Result: Off-by-buffer-size error (78 bytes = likely our buffer state at footer write time) |
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### Theory C: Parquet Version Incompatibility |
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- Tried downgrading from Parquet 1.16.0 to 1.13.1 |
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- **ERROR STILL OCCURS** ❌ |
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- So this is NOT a Parquet version issue |
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## What We've Ruled Out |
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❌ Parquet version mismatch (tested 1.13.1 and 1.16.0) |
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❌ Data corruption (file is valid and complete) |
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❌ `SeaweedInputStream.read()` returning wrong data (logs show correct behavior) |
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❌ File size calculation (contentLength is correct at 1275) |
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❌ Inline content bug (fixed, but issue persists) |
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## What's Actually Wrong |
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The `getPos()` values that Parquet records in the footer during the **write phase** are INCORRECT. |
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Specifically, when Parquet writes the footer metadata with column chunk offsets, it records positions that are **78 bytes less** than they should be. |
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Example: |
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- Parquet writes data at actual file position 383-1267 |
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- But footer says data is at position 1275-1353 |
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- That's an offset error of **892 bytes** (1275 - 383 = 892) |
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- When trying to read the "next" 78 bytes after 1267, it calculates position as 1275 and tries to read 78 bytes |
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## Next Steps |
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### Option 1: Force Buffer Flush Before getPos() Returns |
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Modify `SeaweedOutputStream.getPos()` to always flush the buffer first: |
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```java |
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public synchronized long getPos() { |
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flush(); // Ensure buffer is written before returning position |
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return position + buffer.position(); // buffer.position() should be 0 after flush |
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} |
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``` |
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### Option 2: Track Flushed Position Separately |
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Maintain a `flushedPosition` field that only updates after successful flush: |
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```java |
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private long flushedPosition = 0; |
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public synchronized long getPos() { |
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return flushedPosition + buffer.position(); |
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} |
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private void writeCurrentBufferToService() { |
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// ... write buffer ... |
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flushedPosition += buffer.position(); |
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// ... reset buffer ... |
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} |
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``` |
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### Option 3: Investigate Parquet's Column Chunk Write Order |
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Add detailed logging to see EXACTLY when and where Parquet calls `getPos()` during column chunk writes. This will show us if the issue is: |
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- getPos() called before or after write() |
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- getPos() called during footer write vs. data write |
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- Column chunk boundaries calculated incorrectly |
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## Test Plan |
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1. Implement Option 1 (simplest fix) |
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2. Run full Spark integration test suite |
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3. If that doesn't work, implement Option 2 |
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4. Add detailed `getPos()` call stack logging to see Parquet's exact calling pattern |
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5. Compare with a working FileSystem implementation (e.g., HDFS, S3A) |
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## Files to Investigate |
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1. `SeaweedOutputStream.java` - `getPos()` implementation |
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2. `SeaweedHadoopOutputStream.java` - Hadoop 3.x wrapper |
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3. `SeaweedFileSystem.java` - FSDataOutputStream creation |
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4. Parquet source (external): `InternalParquetRecordWriter.java` - Where it calls `getPos()` |
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## Confidence Level |
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🎯 **99% confident this is a `getPos()` buffer flush timing issue.** |
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The "78 bytes" constant strongly suggests it's the size of buffered data that hasn't been flushed when `getPos()` is called during footer writing. |
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