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switch to multi collection, change readme

pull/2764/head
elee 3 years ago
parent
commit
411c0df3fe
  1. 213
      weed/filer/arangodb/arangodb_store.go
  2. 26
      weed/filer/arangodb/arangodb_store_bucket.go
  3. 10
      weed/filer/arangodb/arangodb_store_kv.go
  4. 92
      weed/filer/arangodb/helpers.go
  5. 48
      weed/filer/arangodb/readme.md

213
weed/filer/arangodb/arangodb_store.go

@ -4,7 +4,9 @@ import (
"context"
"crypto/tls"
"fmt"
"strconv"
"strings"
"sync"
"time"
"github.com/arangodb/go-driver"
@ -19,11 +21,20 @@ func init() {
filer.Stores = append(filer.Stores, &ArangodbStore{})
}
var (
BUCKET_PREFIX = "/buckets"
DEFAULT_COLLECTION = "seaweed_no_bucket"
KVMETA_COLLECTION = "seaweed_kvmeta"
)
type ArangodbStore struct {
connect driver.Connection
client driver.Client
database driver.Database
collection driver.Collection
connect driver.Connection
client driver.Client
database driver.Database
kvCollection driver.Collection
buckets map[string]driver.Collection
mu sync.RWMutex
databaseName string
}
@ -32,7 +43,6 @@ type Model struct {
Key string `json:"_key"`
Directory string `json:"directory,omitempty"`
Name string `json:"name,omitempty"`
Bucket string `json:"bucket,omitempty"`
Ttl string `json:"ttl,omitempty"`
//arangodb does not support binary blobs
@ -46,6 +56,7 @@ func (store *ArangodbStore) GetName() string {
}
func (store *ArangodbStore) Initialize(configuration util.Configuration, prefix string) (err error) {
store.buckets = make(map[string]driver.Collection, 3)
store.databaseName = configuration.GetString(prefix + "db_name")
return store.connection(configuration.GetStringSlice(prefix+"servers"),
configuration.GetString(prefix+"user"),
@ -85,49 +96,7 @@ func (store *ArangodbStore) connection(uris []string, user string, pass string,
if err != nil {
return err
}
coll_name := "files"
ok, err = store.database.CollectionExists(ctx, coll_name)
if err != nil {
return err
}
if ok {
store.collection, err = store.database.Collection(ctx, coll_name)
} else {
store.collection, err = store.database.CreateCollection(ctx, coll_name, &driver.CreateCollectionOptions{})
}
if err != nil {
return err
}
// ensure indices
if _, _, err = store.collection.EnsurePersistentIndex(ctx, []string{"directory", "name"},
&driver.EnsurePersistentIndexOptions{
Name: "directory_name_multi",
Unique: true,
}); err != nil {
return err
}
if _, _, err = store.collection.EnsurePersistentIndex(ctx, []string{"directory"},
&driver.EnsurePersistentIndexOptions{Name: "IDX_directory"}); err != nil {
return err
}
if _, _, err = store.collection.EnsureTTLIndex(ctx, "ttl", 1,
&driver.EnsureTTLIndexOptions{Name: "IDX_TTL"}); err != nil {
return err
}
if _, _, err = store.collection.EnsurePersistentIndex(ctx, []string{"name"}, &driver.EnsurePersistentIndexOptions{
Name: "IDX_name",
}); err != nil {
return err
}
if _, _, err = store.collection.EnsurePersistentIndex(ctx, []string{"bucket"}, &driver.EnsurePersistentIndexOptions{
Name: "IDX_bucket",
Sparse: true, //sparse index, to locate files of bucket
}); err != nil {
if store.kvCollection, err = store.ensureCollection(ctx, KVMETA_COLLECTION); err != nil {
return err
}
return err
@ -140,8 +109,13 @@ const (
)
func (store *ArangodbStore) BeginTransaction(ctx context.Context) (context.Context, error) {
keys := make([]string, 0, len(store.buckets)+1)
for k := range store.buckets {
keys = append(keys, k)
}
keys = append(keys, store.kvCollection.Name())
txn, err := store.database.BeginTransaction(ctx, driver.TransactionCollections{
Exclusive: []string{"files"},
Exclusive: keys,
}, &driver.BeginTransactionOptions{})
if err != nil {
return nil, err
@ -186,23 +160,27 @@ func (store *ArangodbStore) InsertEntry(ctx context.Context, entry *filer.Entry)
if len(entry.Chunks) > 50 {
meta = util.MaybeGzipData(meta)
}
bucket, _ := extractBucket(entry.FullPath)
model := &Model{
Key: hashString(string(entry.FullPath)),
Directory: dir,
Name: name,
Meta: bytesToArray(meta),
Bucket: bucket,
}
if entry.TtlSec > 0 {
model.Ttl = time.Now().Add(time.Second * time.Duration(entry.TtlSec)).Format(time.RFC3339)
} else {
model.Ttl = ""
}
_, err = store.collection.CreateDocument(ctx, model)
targetCollection, err := store.extractBucketCollection(ctx, entry.FullPath)
if err != nil {
return err
}
_, err = targetCollection.CreateDocument(ctx, model)
if driver.IsConflict(err) {
return store.UpdateEntry(ctx, entry)
}
if err != nil {
return fmt.Errorf("InsertEntry %s: %v", entry.FullPath, err)
}
@ -211,21 +189,6 @@ func (store *ArangodbStore) InsertEntry(ctx context.Context, entry *filer.Entry)
}
func extractBucket(fullpath util.FullPath) (string, string) {
if !strings.HasPrefix(string(fullpath), "/buckets/") {
return "", string(fullpath)
}
bucketAndObjectKey := string(fullpath)[len("/buckets/"):]
t := strings.Index(bucketAndObjectKey, "/")
bucket := bucketAndObjectKey
shortPath := "/"
if t > 0 {
bucket = bucketAndObjectKey[:t]
shortPath = string(util.FullPath(bucketAndObjectKey[t:]))
}
return bucket, shortPath
}
func (store *ArangodbStore) UpdateEntry(ctx context.Context, entry *filer.Entry) (err error) {
dir, name := entry.FullPath.DirAndName()
meta, err := entry.EncodeAttributesAndChunks()
@ -247,9 +210,11 @@ func (store *ArangodbStore) UpdateEntry(ctx context.Context, entry *filer.Entry)
} else {
model.Ttl = "none"
}
_, err = store.collection.UpdateDocument(ctx, model.Key, model)
targetCollection, err := store.extractBucketCollection(ctx, entry.FullPath)
if err != nil {
return err
}
_, err = targetCollection.UpdateDocument(ctx, model.Key, model)
if err != nil {
return fmt.Errorf("UpdateEntry %s: %v", entry.FullPath, err)
}
@ -259,11 +224,15 @@ func (store *ArangodbStore) UpdateEntry(ctx context.Context, entry *filer.Entry)
func (store *ArangodbStore) FindEntry(ctx context.Context, fullpath util.FullPath) (entry *filer.Entry, err error) {
var data Model
_, err = store.collection.ReadDocument(ctx, hashString(string(fullpath)), &data)
if driver.IsNotFound(err) {
return nil, filer_pb.ErrNotFound
targetCollection, err := store.extractBucketCollection(ctx, fullpath)
if err != nil {
return nil, err
}
_, err = targetCollection.ReadDocument(ctx, hashString(string(fullpath)), &data)
if err != nil {
if driver.IsNotFound(err) {
return nil, filer_pb.ErrNotFound
}
glog.Errorf("find %s: %v", fullpath, err)
return nil, filer_pb.ErrNotFound
}
@ -281,8 +250,12 @@ func (store *ArangodbStore) FindEntry(ctx context.Context, fullpath util.FullPat
return entry, nil
}
func (store *ArangodbStore) DeleteEntry(ctx context.Context, fullpath util.FullPath) error {
_, err := store.collection.RemoveDocument(ctx, hashString(string(fullpath)))
func (store *ArangodbStore) DeleteEntry(ctx context.Context, fullpath util.FullPath) (err error) {
targetCollection, err := store.extractBucketCollection(ctx, fullpath)
if err != nil {
return err
}
_, err = targetCollection.RemoveDocument(ctx, hashString(string(fullpath)))
if err != nil && !driver.IsNotFound(err) {
glog.Errorf("find %s: %v", fullpath, err)
return fmt.Errorf("delete %s : %v", fullpath, err)
@ -290,14 +263,21 @@ func (store *ArangodbStore) DeleteEntry(ctx context.Context, fullpath util.FullP
return nil
}
func (store *ArangodbStore) DeleteFolderChildren(ctx context.Context, fullpath util.FullPath) error {
// this runs in log time
func (store *ArangodbStore) DeleteFolderChildren(ctx context.Context, fullpath util.FullPath) (err error) {
var query string
targetCollection, err := store.extractBucketCollection(ctx, fullpath)
if err != nil {
return err
}
query = query + fmt.Sprintf(`
for d in files
for d in %s
filter starts_with(d.directory, "%s/") || d.directory == "%s"
remove d._key in files`,
remove d._key in %s`,
targetCollection.Name(),
strings.Join(strings.Split(string(fullpath), "/"), ","),
string(fullpath),
targetCollection.Name(),
)
cur, err := store.database.Query(ctx, query, nil)
if err != nil {
@ -307,70 +287,33 @@ func (store *ArangodbStore) DeleteFolderChildren(ctx context.Context, fullpath u
return nil
}
func (store *ArangodbStore) ListDirectoryEntries(ctx context.Context, dirPath util.FullPath, startFileName string, includeStartFile bool, limit int64, eachEntryFunc filer.ListEachEntryFunc) (lastFileName string, err error) {
return store.ListDirectoryPrefixedEntries(ctx, dirPath, startFileName, includeStartFile, limit, "", eachEntryFunc)
}
func (store *ArangodbStore) ListDirectoryPrefixedEntries(ctx context.Context, dirPath util.FullPath, startFileName string, includeStartFile bool, limit int64, prefix string, eachEntryFunc filer.ListEachEntryFunc) (lastFileName string, err error) {
// if no prefix, then dont use index
if prefix == "" {
return store.ListDirectoryEntries(ctx, dirPath, startFileName, includeStartFile, limit, eachEntryFunc)
targetCollection, err := store.extractBucketCollection(ctx, dirPath)
if err != nil {
return lastFileName, err
}
eq := ""
query := "for d in " + targetCollection.Name()
if includeStartFile {
eq = "filter d.name >= \"" + startFileName + "\""
query = query + " filter d.name >= \"" + startFileName + "\" "
} else {
eq = "filter d.name > \"" + startFileName + "\""
query = query + " filter d.name > \"" + startFileName + "\" "
}
query := fmt.Sprintf(`
for d in files
if prefix != "" {
query = query + fmt.Sprintf(`&& starts_with(d.name, "%s")`, prefix)
}
query = query + `
filter d.directory == @dir
filter starts_with(d.name, @prefix)
%s
sort d.name asc
limit %d
return d`, eq, limit)
cur, err := store.database.Query(ctx, query, map[string]interface{}{"dir": dirPath, "prefix": prefix})
if err != nil {
return lastFileName, fmt.Errorf("failed to list directory entries: find error: %w", err)
`
if limit > 0 {
query = query + "limit " + strconv.Itoa(int(limit))
}
defer cur.Close()
for cur.HasMore() {
var data Model
_, err = cur.ReadDocument(ctx, &data)
if err != nil {
break
}
entry := &filer.Entry{
FullPath: util.NewFullPath(data.Directory, data.Name),
}
lastFileName = data.Name
converted := arrayToBytes(data.Meta)
if decodeErr := entry.DecodeAttributesAndChunks(util.MaybeDecompressData(converted)); decodeErr != nil {
err = decodeErr
glog.V(0).Infof("list %s : %v", entry.FullPath, err)
break
}
if !eachEntryFunc(entry) {
break
}
}
return lastFileName, err
}
func (store *ArangodbStore) ListDirectoryEntries(ctx context.Context, dirPath util.FullPath, startFileName string, includeStartFile bool, limit int64, eachEntryFunc filer.ListEachEntryFunc) (lastFileName string, err error) {
eq := ""
if includeStartFile {
eq = "filter d.name >= \"" + startFileName + "\""
} else {
eq = "filter d.name > \"" + startFileName + "\""
}
query := fmt.Sprintf(`
for d in files
filter d.directory == "%s"
%s
sort d.name asc
limit %d
return d`, string(dirPath), eq, limit)
cur, err := store.database.Query(ctx, query, nil)
query = query + "\n return d"
cur, err := store.database.Query(ctx, query, map[string]interface{}{"dir": dirPath})
if err != nil {
return lastFileName, fmt.Errorf("failed to list directory entries: find error: %w", err)
}
@ -382,7 +325,7 @@ return d`, string(dirPath), eq, limit)
break
}
entry := &filer.Entry{
FullPath: util.NewFullPath(string(dirPath), data.Name),
FullPath: util.NewFullPath(data.Directory, data.Name),
}
lastFileName = data.Name
converted := arrayToBytes(data.Meta)

26
weed/filer/arangodb/arangodb_store_bucket.go

@ -2,28 +2,38 @@ package arangodb
import (
"context"
"github.com/chrislusf/seaweedfs/weed/filer"
"time"
"github.com/arangodb/go-driver"
"github.com/chrislusf/seaweedfs/weed/filer"
"github.com/chrislusf/seaweedfs/weed/glog"
)
var _ filer.BucketAware = (*ArangodbStore)(nil)
func (store *ArangodbStore) OnBucketCreation(bucket string) {
//nothing needs to be done
timeout, cancel := context.WithTimeout(context.Background(), 10*time.Second)
defer cancel()
// create the collection && add to cache
_, err := store.ensureBucket(timeout, bucket)
if err != nil {
glog.V(0).Infof("bucket create %s : %w", bucket, err)
}
}
func (store *ArangodbStore) OnBucketDeletion(bucket string) {
timeout, cancel := context.WithTimeout(context.Background(), 10*time.Second)
defer cancel()
cur, err := store.database.Query(timeout, `
for d in files
filter d.bucket == @bucket
remove d in files`, map[string]interface{}{"bucket": bucket})
collection, err := store.ensureBucket(timeout, bucket)
if err != nil {
glog.V(0).Infof("bucket delete %s : %v", bucket, err)
glog.V(0).Infof("bucket delete %s : %w", bucket, err)
return
}
err = collection.Remove(timeout)
if err != nil && !driver.IsNotFound(err) {
glog.V(0).Infof("bucket delete %s : %w", bucket, err)
return
}
defer cur.Close()
}
func (store *ArangodbStore) CanDropWholeBucket() bool {
return true

10
weed/filer/arangodb/arangodb_store_kv.go

@ -16,14 +16,14 @@ func (store *ArangodbStore) KvPut(ctx context.Context, key []byte, value []byte)
Meta: bytesToArray(value),
}
exists, err := store.collection.DocumentExists(ctx, model.Key)
exists, err := store.kvCollection.DocumentExists(ctx, model.Key)
if err != nil {
return fmt.Errorf("kv put: %v", err)
}
if exists {
_, err = store.collection.UpdateDocument(ctx, model.Key, model)
_, err = store.kvCollection.UpdateDocument(ctx, model.Key, model)
} else {
_, err = store.collection.CreateDocument(ctx, model)
_, err = store.kvCollection.CreateDocument(ctx, model)
}
if err != nil {
return fmt.Errorf("kv put: %v", err)
@ -33,7 +33,7 @@ func (store *ArangodbStore) KvPut(ctx context.Context, key []byte, value []byte)
}
func (store *ArangodbStore) KvGet(ctx context.Context, key []byte) (value []byte, err error) {
var model Model
_, err = store.collection.ReadDocument(ctx, hashString(".kvstore."+string(key)), &model)
_, err = store.kvCollection.ReadDocument(ctx, hashString(".kvstore."+string(key)), &model)
if driver.IsNotFound(err) {
return nil, filer.ErrKvNotFound
}
@ -45,7 +45,7 @@ func (store *ArangodbStore) KvGet(ctx context.Context, key []byte) (value []byte
}
func (store *ArangodbStore) KvDelete(ctx context.Context, key []byte) (err error) {
_, err = store.collection.RemoveDocument(ctx, hashString(".kvstore."+string(key)))
_, err = store.kvCollection.RemoveDocument(ctx, hashString(".kvstore."+string(key)))
if err != nil {
glog.Errorf("kv del: %v", err)
return filer.ErrKvNotFound

92
weed/filer/arangodb/helpers.go

@ -1,10 +1,15 @@
package arangodb
import (
"context"
"crypto/md5"
"encoding/binary"
"encoding/hex"
"io"
"strings"
"github.com/arangodb/go-driver"
"github.com/chrislusf/seaweedfs/weed/util"
)
//convert a string into arango-key safe hex bytes hash
@ -42,3 +47,90 @@ func arrayToBytes(xs []uint64) []byte {
}
return out[:first]
}
// gets the bucket name out of filepath
func extractBucket(fullpath util.FullPath) (string, string) {
if !strings.HasPrefix(string(fullpath), BUCKET_PREFIX+"/") {
return "", string(fullpath)
}
if strings.Count(string(fullpath), "/") < 2 {
return "", string(fullpath)
}
bucketAndObjectKey := string(fullpath)[len("/buckets/"):]
t := strings.Index(bucketAndObjectKey, "/")
bucket := bucketAndObjectKey
shortPath := "/"
if t > 0 {
bucket = bucketAndObjectKey[:t]
shortPath = string(util.FullPath(bucketAndObjectKey[t:]))
}
return bucket, shortPath
}
// gets the collection the bucket points to from filepath
func (store *ArangodbStore) extractBucketCollection(ctx context.Context, fullpath util.FullPath) (c driver.Collection, err error) {
bucket, _ := extractBucket(fullpath)
if bucket == "" {
bucket = DEFAULT_COLLECTION
}
c, err = store.ensureBucket(ctx, bucket)
if err != nil {
return nil, err
}
return c, err
}
// get bucket collection from cache. if not exist, creates the buckets collection and grab it
func (store *ArangodbStore) ensureBucket(ctx context.Context, bucket string) (bc driver.Collection, err error) {
var ok bool
store.mu.RLock()
bc, ok = store.buckets[bucket]
store.mu.RUnlock()
if ok {
return bc, nil
}
store.mu.Lock()
defer store.mu.Unlock()
store.buckets[bucket], err = store.ensureCollection(ctx, bucket)
if err != nil {
return nil, err
}
return store.buckets[bucket], nil
}
// creates collection if not exist, ensures indices if not exist
func (store *ArangodbStore) ensureCollection(ctx context.Context, name string) (c driver.Collection, err error) {
ok, err := store.database.CollectionExists(ctx, name)
if err != nil {
return
}
if ok {
c, err = store.database.Collection(ctx, name)
} else {
c, err = store.database.CreateCollection(ctx, name, &driver.CreateCollectionOptions{})
}
if err != nil {
return
}
// ensure indices
if _, _, err = c.EnsurePersistentIndex(ctx, []string{"directory", "name"},
&driver.EnsurePersistentIndexOptions{
Name: "directory_name_multi", Unique: true,
}); err != nil {
return
}
if _, _, err = c.EnsurePersistentIndex(ctx, []string{"directory"},
&driver.EnsurePersistentIndexOptions{Name: "IDX_directory"}); err != nil {
return
}
if _, _, err = c.EnsureTTLIndex(ctx, "ttl", 1,
&driver.EnsureTTLIndexOptions{Name: "IDX_TTL"}); err != nil {
return
}
if _, _, err = c.EnsurePersistentIndex(ctx, []string{"name"}, &driver.EnsurePersistentIndexOptions{
Name: "IDX_name",
}); err != nil {
return
}
return c, nil
}

48
weed/filer/arangodb/readme.md

@ -3,7 +3,6 @@
database: https://github.com/arangodb/arangodb
go driver: https://github.com/arangodb/go-driver
options:
```
@ -11,40 +10,43 @@ options:
enabled=true
db_name="seaweedfs"
servers=["http://localhost:8529"]
#basic auth
user="root"
pass="test"
# whether to enable fulltext index
# this allows for directory prefix query
fulltext=true
# tls settings
insecure_skip_verify=true
```
supports buckets with an extra field in document.
omitempty means extra space is not used.
i test with
i test using this dev database:
`docker run -p 8529:8529 -e ARANGO_ROOT_PASSWORD=test arangodb/arangodb:3.9.0`
## todo
performance test
## features i don't personally need but are missing
[ ] provide tls cert to arango
[ ] authentication that is not basic auth
[ ] synchronise endpoint interval config
[ ] automatic creation of custom index
[ ] configure default arangodb collection sharding rules
[ ] configure default arangodb collection replication rules
## thoughts
should there be one collection per bucket? this would make deleting a bucket O(1) instead of O(n)
## comparison
## complexity
ok, so if https://www.arangodb.com/docs/stable/indexing-index-basics.html#persistent-index is correct
it should be log time to the number of files in the directory
and constant time if you have full directory + file
deleting a folder should be log time to number of folders + files that need to be deleted
O(1)
- InsertEntry
- UpdateEntry
- FindEntry
- DeleteEntry
- KvPut
- KvGet
- KvDelete
O(log(BUCKET_SIZE))
- DeleteFolderChildren
O(log(DIRECTORY_SIZE))
- ListDirectoryEntries
- ListDirectoryPrefixedEntries
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